Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.69■□□□□ 0.58
LSP1P33241 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.69■□□□□ 0.58
LSP1P33241 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.69■□□□□ 0.58
LSP1P33241 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.69■□□□□ 0.58
LSP1P33241 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LSP1P33241 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.69■□□□□ 0.58
LSP1P33241 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.69■□□□□ 0.58
LSP1P33241 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.69■□□□□ 0.58
LSP1P33241 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.69■□□□□ 0.58
LSP1P33241 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
LSP1P33241 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.69■□□□□ 0.58
LSP1P33241 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSP1P33241 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.68■□□□□ 0.58
LSP1P33241 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.68■□□□□ 0.58
LSP1P33241 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.68■□□□□ 0.58
LSP1P33241 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.68■□□□□ 0.58
LSP1P33241 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LSP1P33241 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LSP1P33241 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSP1P33241 LINC00602-201ENST00000629776 2065 ntBASIC18.67■□□□□ 0.58
LSP1P33241 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.67■□□□□ 0.58
LSP1P33241 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LSP1P33241 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.67■□□□□ 0.58
LSP1P33241 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSP1P33241 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSP1P33241 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.67■□□□□ 0.58
LSP1P33241 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LSP1P33241 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSP1P33241 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.66■□□□□ 0.58
LSP1P33241 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.66■□□□□ 0.58
LSP1P33241 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSP1P33241 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSP1P33241 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSP1P33241 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LSP1P33241 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSP1P33241 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms