Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.07■□□□□ 0.32
SHC1P29353 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SHC1P29353 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC1P29353 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC1P29353 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.06■□□□□ 0.32
SHC1P29353 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.06■□□□□ 0.32
SHC1P29353 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.06■□□□□ 0.32
SHC1P29353 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC1P29353 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SHC1P29353 AC008622.2-201ENST00000617006 1229 ntBASIC17.06■□□□□ 0.32
SHC1P29353 AC133561.5-201ENST00000635547 218 ntBASIC17.06■□□□□ 0.32
SHC1P29353 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
SHC1P29353 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC1P29353 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SHC1P29353 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC1P29353 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
SHC1P29353 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 AL031598.1-201ENST00000561511 1773 ntBASIC17.05■□□□□ 0.32
SHC1P29353 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SHC1P29353 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 PCDHB18P-201ENST00000524813 2368 ntBASIC17.05■□□□□ 0.32
SHC1P29353 AC211429.1-201ENST00000415277 523 ntBASIC17.05■□□□□ 0.32
SHC1P29353 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.05■□□□□ 0.32
SHC1P29353 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.05■□□□□ 0.32
SHC1P29353 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.05■□□□□ 0.32
SHC1P29353 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.05■□□□□ 0.32
SHC1P29353 C2orf69P3-201ENST00000565542 1120 ntBASIC17.05■□□□□ 0.32
SHC1P29353 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.05■□□□□ 0.32
SHC1P29353 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.05■□□□□ 0.32
SHC1P29353 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC1P29353 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
SHC1P29353 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.04■□□□□ 0.32
SHC1P29353 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHC1P29353 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
SHC1P29353 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
SHC1P29353 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.04■□□□□ 0.32
SHC1P29353 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SHC1P29353 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.04■□□□□ 0.32
SHC1P29353 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SHC1P29353 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.04■□□□□ 0.32
SHC1P29353 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.04■□□□□ 0.32
SHC1P29353 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.04■□□□□ 0.32
SHC1P29353 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.04■□□□□ 0.32
SHC1P29353 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.04■□□□□ 0.32
SHC1P29353 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.04■□□□□ 0.32
SHC1P29353 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.04■□□□□ 0.32
SHC1P29353 AL023803.3-201ENST00000615559 522 ntBASIC17.04■□□□□ 0.32
SHC1P29353 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SHC1P29353 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.04■□□□□ 0.32
SHC1P29353 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.04■□□□□ 0.32
SHC1P29353 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC1P29353 LTB4R2-202ENST00000528054 3092 ntBASIC17.04■□□□□ 0.32
SHC1P29353 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms