Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN6P29350 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN6P29350 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN6P29350 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN6P29350 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.68■□□□□ 0.42
PTPN6P29350 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 AC091390.4-202ENST00000476426 537 ntBASIC17.68■□□□□ 0.42
PTPN6P29350 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN6P29350 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 AP003071.4-201ENST00000562276 1284 ntBASIC17.68■□□□□ 0.42
PTPN6P29350 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN6P29350 AC067852.2-201ENST00000590513 2313 ntBASIC17.68■□□□□ 0.42
PTPN6P29350 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN6P29350 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PTPN6P29350 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN6P29350 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN6P29350 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN6P29350 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN6P29350 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN6P29350 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN6P29350 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PTPN6P29350 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 KRT8P45-201ENST00000414328 1447 ntBASIC17.67■□□□□ 0.42
PTPN6P29350 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN6P29350 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN6P29350 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.67■□□□□ 0.42
PTPN6P29350 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 AL355075.4-201ENST00000554988 638 ntBASIC17.67■□□□□ 0.42
PTPN6P29350 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN6P29350 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.67■□□□□ 0.42
PTPN6P29350 AL031985.4-201ENST00000642138 673 ntBASIC17.67■□□□□ 0.42
PTPN6P29350 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN6P29350 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN6P29350 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN6P29350 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN6P29350 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN6P29350 AC135776.1-201ENST00000319817 2481 ntBASIC17.66■□□□□ 0.42
PTPN6P29350 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN6P29350 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN6P29350 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN6P29350 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN6P29350 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN6P29350 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN6P29350 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN6P29350 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN6P29350 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN6P29350 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPN6P29350 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN6P29350 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN6P29350 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN6P29350 AC026271.3-201ENST00000571884 352 ntBASIC17.66■□□□□ 0.42
PTPN6P29350 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
PTPN6P29350 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPN6P29350 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 AC131212.4-201ENST00000623606 975 ntBASIC17.66■□□□□ 0.42
PTPN6P29350 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN6P29350 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN6P29350 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PTPN6P29350 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN6P29350 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN6P29350 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN6P29350 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN6P29350 AC008764.6-201ENST00000595909 2069 ntBASIC17.65■□□□□ 0.42
PTPN6P29350 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms