Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD3P28288 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD3P28288 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ABCD3P28288 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD3P28288 AC104076.2-201ENST00000448912 469 ntBASIC17.14■□□□□ 0.33
ABCD3P28288 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCD3P28288 KRT18P41-201ENST00000518924 1277 ntBASIC17.14■□□□□ 0.33
ABCD3P28288 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCD3P28288 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD3P28288 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCD3P28288 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCD3P28288 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ABCD3P28288 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ABCD3P28288 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ABCD3P28288 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCD3P28288 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ABCD3P28288 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 AK4P3-201ENST00000418260 669 ntBASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCD3P28288 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCD3P28288 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 AC024243.1-201ENST00000609234 778 ntBASIC17.13■□□□□ 0.33
ABCD3P28288 AC011558.1-201ENST00000623459 338 ntBASIC17.13■□□□□ 0.33
ABCD3P28288 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCD3P28288 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
ABCD3P28288 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ABCD3P28288 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCD3P28288 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCD3P28288 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ABCD3P28288 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 AL499627.1-201ENST00000569373 2188 ntBASIC17.12■□□□□ 0.33
ABCD3P28288 LETM1P2-201ENST00000597330 2178 ntBASIC17.12■□□□□ 0.33
ABCD3P28288 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.12■□□□□ 0.33
ABCD3P28288 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.12■□□□□ 0.33
ABCD3P28288 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.12■□□□□ 0.33
ABCD3P28288 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.12■□□□□ 0.33
ABCD3P28288 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
ABCD3P28288 GCSHP2-201ENST00000560971 527 ntBASIC17.12■□□□□ 0.33
ABCD3P28288 AL441883.1-201ENST00000566170 1045 ntBASIC17.12■□□□□ 0.33
ABCD3P28288 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ABCD3P28288 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCD3P28288 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms