Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNA3P22001 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.78■■□□□ 1.24
KCNA3P22001 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.78■■□□□ 1.24
KCNA3P22001 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.78■■□□□ 1.24
KCNA3P22001 Z83851.2-201ENST00000609564 659 ntBASIC22.78■■□□□ 1.24
KCNA3P22001 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
KCNA3P22001 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNA3P22001 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNA3P22001 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNA3P22001 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNA3P22001 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
KCNA3P22001 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.77■■□□□ 1.24
KCNA3P22001 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.77■■□□□ 1.24
KCNA3P22001 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.77■■□□□ 1.24
KCNA3P22001 AC092910.1-201ENST00000482027 1129 ntBASIC22.77■■□□□ 1.24
KCNA3P22001 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
KCNA3P22001 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.77■■□□□ 1.24
KCNA3P22001 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.77■■□□□ 1.24
KCNA3P22001 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.77■■□□□ 1.24
KCNA3P22001 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.77■■□□□ 1.24
KCNA3P22001 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNA3P22001 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
KCNA3P22001 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
KCNA3P22001 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.77■■□□□ 1.24
KCNA3P22001 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
KCNA3P22001 INTS4P1-201ENST00000438455 1935 ntBASIC22.76■■□□□ 1.23
KCNA3P22001 AL357033.4-201ENST00000617703 1807 ntBASIC22.76■■□□□ 1.23
KCNA3P22001 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KCNA3P22001 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KCNA3P22001 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.76■■□□□ 1.23
KCNA3P22001 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
KCNA3P22001 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KCNA3P22001 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.76■■□□□ 1.23
KCNA3P22001 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
KCNA3P22001 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
KCNA3P22001 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
KCNA3P22001 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.75■■□□□ 1.23
KCNA3P22001 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.75■■□□□ 1.23
KCNA3P22001 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 AP005117.1-201ENST00000584346 1413 ntBASIC22.75■■□□□ 1.23
KCNA3P22001 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
KCNA3P22001 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.75■■□□□ 1.23
KCNA3P22001 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
KCNA3P22001 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.75■■□□□ 1.23
KCNA3P22001 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 AC040169.1-201ENST00000565382 521 ntBASIC22.75■■□□□ 1.23
KCNA3P22001 MIR3687-2-201ENST00000577708 61 ntBASIC22.75■■□□□ 1.23
KCNA3P22001 MIR3687-1-201ENST00000614492 61 ntBASIC22.75■■□□□ 1.23
KCNA3P22001 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
KCNA3P22001 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.75■■□□□ 1.23
KCNA3P22001 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.74■■□□□ 1.23
KCNA3P22001 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
KCNA3P22001 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.74■■□□□ 1.23
KCNA3P22001 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
KCNA3P22001 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.74■■□□□ 1.23
KCNA3P22001 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
KCNA3P22001 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.74■■□□□ 1.23
KCNA3P22001 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.74■■□□□ 1.23
KCNA3P22001 DNAJB3-202ENST00000449667 1266 ntBASIC22.74■■□□□ 1.23
KCNA3P22001 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.74■■□□□ 1.23
KCNA3P22001 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.74■■□□□ 1.23
KCNA3P22001 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.74■■□□□ 1.23
KCNA3P22001 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
KCNA3P22001 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.74■■□□□ 1.23
KCNA3P22001 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.74■■□□□ 1.23
KCNA3P22001 AC083906.6-201ENST00000641366 219 ntBASIC22.74■■□□□ 1.23
KCNA3P22001 AC079781.4-201ENST00000641908 219 ntBASIC22.74■■□□□ 1.23
KCNA3P22001 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.74■■□□□ 1.23
KCNA3P22001 TCF3P1-201ENST00000423021 1937 ntBASIC22.74■■□□□ 1.23
KCNA3P22001 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
KCNA3P22001 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.74■■□□□ 1.23
KCNA3P22001 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
KCNA3P22001 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
KCNA3P22001 Z82202.1-201ENST00000623446 1880 ntBASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms