Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.51■■□□□ 1.03
ERCC3P19447 KRT8P26-201ENST00000534154 1276 ntBASIC21.51■■□□□ 1.03
ERCC3P19447 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 AP002414.4-201ENST00000589764 1148 ntBASIC21.51■■□□□ 1.03
ERCC3P19447 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.51■■□□□ 1.03
ERCC3P19447 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ERCC3P19447 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.51■■□□□ 1.03
ERCC3P19447 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ERCC3P19447 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ERCC3P19447 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.51■■□□□ 1.03
ERCC3P19447 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 AC093525.10-201ENST00000625130 1569 ntBASIC21.5■■□□□ 1.03
ERCC3P19447 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.5■■□□□ 1.03
ERCC3P19447 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ERCC3P19447 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.5■■□□□ 1.03
ERCC3P19447 MIR662-201ENST00000384847 95 ntBASIC21.5■■□□□ 1.03
ERCC3P19447 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.5■■□□□ 1.03
ERCC3P19447 RN7SL510P-201ENST00000581311 263 ntBASIC21.5■■□□□ 1.03
ERCC3P19447 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
ERCC3P19447 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ERCC3P19447 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.5■■□□□ 1.03
ERCC3P19447 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ERCC3P19447 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.5■■□□□ 1.03
ERCC3P19447 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.5■■□□□ 1.03
ERCC3P19447 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.5■■□□□ 1.03
ERCC3P19447 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.5■■□□□ 1.03
ERCC3P19447 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.49■■□□□ 1.03
ERCC3P19447 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC3P19447 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.49■■□□□ 1.03
ERCC3P19447 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
ERCC3P19447 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
ERCC3P19447 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ERCC3P19447 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC3P19447 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.49■■□□□ 1.03
ERCC3P19447 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.49■■□□□ 1.03
ERCC3P19447 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC3P19447 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC3P19447 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
ERCC3P19447 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ERCC3P19447 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 AL109659.2-201ENST00000606809 1674 ntBASIC21.49■■□□□ 1.03
ERCC3P19447 TEX21P-204ENST00000641479 1693 ntBASIC21.49■■□□□ 1.03
ERCC3P19447 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.49■■□□□ 1.03
ERCC3P19447 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 RCC2P3-201ENST00000418112 1537 ntBASIC21.49■■□□□ 1.03
ERCC3P19447 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
ERCC3P19447 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.48■■□□□ 1.03
ERCC3P19447 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 AC008556.1-201ENST00000610908 2040 ntBASIC21.48■■□□□ 1.03
ERCC3P19447 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 AL512353.2-201ENST00000448759 1962 ntBASIC21.48■■□□□ 1.03
ERCC3P19447 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ERCC3P19447 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 AC005332.7-201ENST00000614046 2005 ntBASIC21.48■■□□□ 1.03
ERCC3P19447 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ERCC3P19447 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.48■■□□□ 1.03
ERCC3P19447 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ERCC3P19447 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC3P19447 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ERCC3P19447 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.47■■□□□ 1.03
ERCC3P19447 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms