Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
COL11A2P13942 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL11A2P13942 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.74■■□□□ 1.23
COL11A2P13942 RBM17P3-201ENST00000417687 1192 ntBASIC22.74■■□□□ 1.23
COL11A2P13942 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.74■■□□□ 1.23
COL11A2P13942 AC012640.2-201ENST00000561606 901 ntBASIC22.74■■□□□ 1.23
COL11A2P13942 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.74■■□□□ 1.23
COL11A2P13942 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.74■■□□□ 1.23
COL11A2P13942 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
COL11A2P13942 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
COL11A2P13942 FAM215A-202ENST00000632077 792 ntBASIC22.74■■□□□ 1.23
COL11A2P13942 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.74■■□□□ 1.23
COL11A2P13942 AL157384.1-201ENST00000445995 2473 ntBASIC22.74■■□□□ 1.23
COL11A2P13942 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.73■■□□□ 1.23
COL11A2P13942 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.73■■□□□ 1.23
COL11A2P13942 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.73■■□□□ 1.23
COL11A2P13942 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.73■■□□□ 1.23
COL11A2P13942 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.73■■□□□ 1.23
COL11A2P13942 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.73■■□□□ 1.23
COL11A2P13942 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.73■■□□□ 1.23
COL11A2P13942 AC055717.3-201ENST00000622967 595 ntBASIC22.73■■□□□ 1.23
COL11A2P13942 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.73■■□□□ 1.23
COL11A2P13942 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.73■■□□□ 1.23
COL11A2P13942 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL11A2P13942 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL11A2P13942 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.72■■□□□ 1.23
COL11A2P13942 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.72■■□□□ 1.23
COL11A2P13942 SART3-203ENST00000546611 1184 ntBASIC22.72■■□□□ 1.23
COL11A2P13942 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.72■■□□□ 1.23
COL11A2P13942 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL11A2P13942 AC098831.1-202ENST00000438821 336 ntBASIC22.71■■□□□ 1.23
COL11A2P13942 MIR5100-201ENST00000579544 119 ntBASIC22.71■■□□□ 1.23
COL11A2P13942 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.71■■□□□ 1.23
COL11A2P13942 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.71■■□□□ 1.23
COL11A2P13942 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.71■■□□□ 1.23
COL11A2P13942 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL11A2P13942 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL11A2P13942 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 AC112777.1-201ENST00000540175 1423 ntBASIC22.71■■□□□ 1.23
COL11A2P13942 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL11A2P13942 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.71■■□□□ 1.23
COL11A2P13942 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.71■■□□□ 1.23
COL11A2P13942 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
COL11A2P13942 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
COL11A2P13942 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COL11A2P13942 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
COL11A2P13942 AC093909.1-201ENST00000504731 1122 ntBASIC22.7■■□□□ 1.22
COL11A2P13942 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.7■■□□□ 1.22
COL11A2P13942 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.7■■□□□ 1.22
COL11A2P13942 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.7■■□□□ 1.22
COL11A2P13942 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.7■■□□□ 1.22
COL11A2P13942 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.7■■□□□ 1.22
COL11A2P13942 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.7■■□□□ 1.22
COL11A2P13942 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
COL11A2P13942 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.7■■□□□ 1.22
COL11A2P13942 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL11A2P13942 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
COL11A2P13942 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.69■■□□□ 1.22
COL11A2P13942 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
COL11A2P13942 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
COL11A2P13942 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.69■■□□□ 1.22
COL11A2P13942 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.69■■□□□ 1.22
COL11A2P13942 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms