Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.42■□□□□ 0.38
TPRP12270 AC020763.4-201ENST00000623414 4170 ntBASIC17.42■□□□□ 0.38
TPRP12270 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TPRP12270 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TPRP12270 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.42■□□□□ 0.38
TPRP12270 AC002472.2-201ENST00000442739 958 ntBASIC17.42■□□□□ 0.38
TPRP12270 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 AC093214.1-201ENST00000511688 1107 ntBASIC17.42■□□□□ 0.38
TPRP12270 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.42■□□□□ 0.38
TPRP12270 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.42■□□□□ 0.38
TPRP12270 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.42■□□□□ 0.38
TPRP12270 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TPRP12270 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPRP12270 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.42■□□□□ 0.38
TPRP12270 AC009947.1-201ENST00000444350 727 ntBASIC17.42■□□□□ 0.38
TPRP12270 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.42■□□□□ 0.38
TPRP12270 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TPRP12270 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
TPRP12270 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
TPRP12270 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TPRP12270 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TPRP12270 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TPRP12270 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.41■□□□□ 0.38
TPRP12270 AC092910.1-201ENST00000482027 1129 ntBASIC17.41■□□□□ 0.38
TPRP12270 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TPRP12270 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TPRP12270 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.41■□□□□ 0.38
TPRP12270 AL353692.3-201ENST00000407031 1396 ntBASIC17.41■□□□□ 0.38
TPRP12270 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TPRP12270 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPRP12270 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.41■□□□□ 0.38
TPRP12270 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.4■□□□□ 0.38
TPRP12270 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.4■□□□□ 0.38
TPRP12270 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.4■□□□□ 0.38
TPRP12270 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TPRP12270 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TPRP12270 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 AL024507.2-201ENST00000606070 2574 ntBASIC17.4■□□□□ 0.38
TPRP12270 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TPRP12270 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TPRP12270 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.4■□□□□ 0.38
TPRP12270 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TPRP12270 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 ELK2BP-201ENST00000415014 1224 ntBASIC17.4■□□□□ 0.38
TPRP12270 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.4■□□□□ 0.38
TPRP12270 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TPRP12270 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.4■□□□□ 0.38
TPRP12270 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.4■□□□□ 0.38
TPRP12270 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.4■□□□□ 0.38
TPRP12270 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.4■□□□□ 0.38
TPRP12270 AC092865.6-201ENST00000642101 219 ntBASIC17.4■□□□□ 0.38
TPRP12270 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.4■□□□□ 0.38
TPRP12270 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPRP12270 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TPRP12270 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TPRP12270 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TPRP12270 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TPRP12270 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.39■□□□□ 0.38
TPRP12270 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TPRP12270 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.39■□□□□ 0.38
TPRP12270 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TPRP12270 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.39■□□□□ 0.38
TPRP12270 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.39■□□□□ 0.38
TPRP12270 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.39■□□□□ 0.38
TPRP12270 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TPRP12270 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms