Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHRNB1P11230 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNB1P11230 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHRNB1P11230 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHRNB1P11230 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHRNB1P11230 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNB1P11230 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNB1P11230 GUSBP12-201ENST00000513727 720 ntBASIC18.85■□□□□ 0.61
CHRNB1P11230 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.85■□□□□ 0.61
CHRNB1P11230 Z82202.1-201ENST00000623446 1880 ntBASIC18.85■□□□□ 0.61
CHRNB1P11230 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNB1P11230 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 TEX21P-204ENST00000641479 1693 ntBASIC18.85■□□□□ 0.61
CHRNB1P11230 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNB1P11230 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNB1P11230 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHRNB1P11230 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHRNB1P11230 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHRNB1P11230 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
CHRNB1P11230 SAPCD2P3-201ENST00000455031 850 ntBASIC18.84■□□□□ 0.61
CHRNB1P11230 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHRNB1P11230 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.84■□□□□ 0.61
CHRNB1P11230 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHRNB1P11230 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 REXO1L6P-202ENST00000619970 1078 ntBASIC18.84■□□□□ 0.61
CHRNB1P11230 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNB1P11230 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.84■□□□□ 0.61
CHRNB1P11230 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNB1P11230 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNB1P11230 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNB1P11230 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNB1P11230 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 AL590627.1-203ENST00000421194 1026 ntBASIC18.83■□□□□ 0.6
CHRNB1P11230 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.83■□□□□ 0.6
CHRNB1P11230 AF238378.1-201ENST00000526806 358 ntBASIC18.83■□□□□ 0.6
CHRNB1P11230 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNB1P11230 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.83■□□□□ 0.6
CHRNB1P11230 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNB1P11230 NSUN5P1-202ENST00000421140 1535 ntBASIC18.83■□□□□ 0.6
CHRNB1P11230 NSUN5P2-203ENST00000457352 1529 ntBASIC18.83■□□□□ 0.6
CHRNB1P11230 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CHRNB1P11230 KRT8P32-201ENST00000512863 1461 ntBASIC18.83■□□□□ 0.6
CHRNB1P11230 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNB1P11230 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNB1P11230 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNB1P11230 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CHRNB1P11230 AC034236.2-201ENST00000606662 1610 ntBASIC18.82■□□□□ 0.6
CHRNB1P11230 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNB1P11230 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 AC006333.2-201ENST00000607957 2099 ntBASIC18.82■□□□□ 0.6
CHRNB1P11230 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNB1P11230 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNB1P11230 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNB1P11230 AP005901.3-202ENST00000581653 237 ntBASIC18.82■□□□□ 0.6
CHRNB1P11230 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNB1P11230 AC024563.2-201ENST00000603282 481 ntBASIC18.82■□□□□ 0.6
CHRNB1P11230 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms