Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.82■□□□□ 0.92
RARBP10826 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.82■□□□□ 0.92
RARBP10826 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RARBP10826 AKR1C7P-201ENST00000305623 895 ntBASIC20.82■□□□□ 0.92
RARBP10826 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RARBP10826 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.82■□□□□ 0.92
RARBP10826 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.82■□□□□ 0.92
RARBP10826 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 BX640515.1-201ENST00000617215 977 ntBASIC20.82■□□□□ 0.92
RARBP10826 NSUN5P1-202ENST00000421140 1535 ntBASIC20.82■□□□□ 0.92
RARBP10826 NSUN5P2-203ENST00000457352 1529 ntBASIC20.82■□□□□ 0.92
RARBP10826 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.82■□□□□ 0.92
RARBP10826 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARBP10826 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RARBP10826 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 AL590627.1-203ENST00000421194 1026 ntBASIC20.81■□□□□ 0.92
RARBP10826 RN7SL606P-201ENST00000472779 293 ntBASIC20.81■□□□□ 0.92
RARBP10826 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.81■□□□□ 0.92
RARBP10826 AC064862.7-201ENST00000604520 867 ntBASIC20.81■□□□□ 0.92
RARBP10826 REXO1L6P-202ENST00000619970 1078 ntBASIC20.81■□□□□ 0.92
RARBP10826 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RARBP10826 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.81■□□□□ 0.92
RARBP10826 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RARBP10826 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RARBP10826 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.81■□□□□ 0.92
RARBP10826 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RARBP10826 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.8■□□□□ 0.92
RARBP10826 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.8■□□□□ 0.92
RARBP10826 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 AP000593.1-201ENST00000393668 712 ntBASIC20.8■□□□□ 0.92
RARBP10826 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 NUS1P2-201ENST00000417358 873 ntBASIC20.8■□□□□ 0.92
RARBP10826 TSPY12P-201ENST00000421279 868 ntBASIC20.8■□□□□ 0.92
RARBP10826 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RARBP10826 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.8■□□□□ 0.92
RARBP10826 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.8■□□□□ 0.92
RARBP10826 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.8■□□□□ 0.92
RARBP10826 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.8■□□□□ 0.92
RARBP10826 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RARBP10826 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.8■□□□□ 0.92
RARBP10826 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.8■□□□□ 0.92
RARBP10826 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RARBP10826 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.79■□□□□ 0.92
RARBP10826 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
RARBP10826 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RARBP10826 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.79■□□□□ 0.92
RARBP10826 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RARBP10826 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.79■□□□□ 0.92
RARBP10826 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.79■□□□□ 0.92
RARBP10826 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RARBP10826 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms