Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.9■□□□□ 0.3
FREM3P0C091 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.9■□□□□ 0.3
FREM3P0C091 ZNF444P1-201ENST00000559497 298 ntBASIC16.9■□□□□ 0.3
FREM3P0C091 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FREM3P0C091 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.9■□□□□ 0.3
FREM3P0C091 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FREM3P0C091 AL358472.4-201ENST00000633140 710 ntBASIC16.9■□□□□ 0.3
FREM3P0C091 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.89■□□□□ 0.29
FREM3P0C091 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM3P0C091 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM3P0C091 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 AC008556.1-201ENST00000610908 2040 ntBASIC16.89■□□□□ 0.29
FREM3P0C091 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 AC092647.4-201ENST00000457211 535 ntBASIC16.89■□□□□ 0.29
FREM3P0C091 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM3P0C091 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.89■□□□□ 0.29
FREM3P0C091 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.89■□□□□ 0.29
FREM3P0C091 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.89■□□□□ 0.29
FREM3P0C091 AC104581.1-202ENST00000635932 2618 ntBASIC16.89■□□□□ 0.29
FREM3P0C091 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
FREM3P0C091 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FREM3P0C091 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 BX664615.1-201ENST00000443558 458 ntBASIC16.88■□□□□ 0.29
FREM3P0C091 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 AC087388.1-201ENST00000571370 1112 ntBASIC16.88■□□□□ 0.29
FREM3P0C091 AC140113.3-201ENST00000605663 199 ntBASIC16.88■□□□□ 0.29
FREM3P0C091 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
FREM3P0C091 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.88■□□□□ 0.29
FREM3P0C091 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.88■□□□□ 0.29
FREM3P0C091 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.88■□□□□ 0.29
FREM3P0C091 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FREM3P0C091 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.88■□□□□ 0.29
FREM3P0C091 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.88■□□□□ 0.29
FREM3P0C091 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.88■□□□□ 0.29
FREM3P0C091 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.88■□□□□ 0.29
FREM3P0C091 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.88■□□□□ 0.29
FREM3P0C091 AL157888.1-201ENST00000631930 593 ntBASIC16.88■□□□□ 0.29
FREM3P0C091 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.88■□□□□ 0.29
FREM3P0C091 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 Z98044.1-201ENST00000632503 1764 ntBASIC16.88■□□□□ 0.29
FREM3P0C091 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 AC034236.2-201ENST00000606662 1610 ntBASIC16.88■□□□□ 0.29
FREM3P0C091 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FREM3P0C091 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 AC092597.1-201ENST00000487352 616 ntBASIC16.87■□□□□ 0.29
FREM3P0C091 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.87■□□□□ 0.29
FREM3P0C091 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
FREM3P0C091 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
FREM3P0C091 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FREM3P0C091 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms