Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC6P09630 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HOXC6P09630 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HOXC6P09630 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
HOXC6P09630 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXC6P09630 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXC6P09630 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.02■□□□□ 0.96
HOXC6P09630 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.02■□□□□ 0.96
HOXC6P09630 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXC6P09630 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
HOXC6P09630 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
HOXC6P09630 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXC6P09630 AL353692.3-201ENST00000407031 1396 ntBASIC21.02■□□□□ 0.96
HOXC6P09630 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXC6P09630 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
HOXC6P09630 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
HOXC6P09630 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXC6P09630 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXC6P09630 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXC6P09630 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXC6P09630 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
HOXC6P09630 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.02■□□□□ 0.95
HOXC6P09630 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.02■□□□□ 0.95
HOXC6P09630 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.01■□□□□ 0.95
HOXC6P09630 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
HOXC6P09630 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
HOXC6P09630 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
HOXC6P09630 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC6P09630 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 AC091607.1-201ENST00000490318 1060 ntBASIC21.01■□□□□ 0.95
HOXC6P09630 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HOXC6P09630 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.01■□□□□ 0.95
HOXC6P09630 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.01■□□□□ 0.95
HOXC6P09630 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC6P09630 AC064862.7-201ENST00000604520 867 ntBASIC21.01■□□□□ 0.95
HOXC6P09630 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXC6P09630 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXC6P09630 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HOXC6P09630 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
HOXC6P09630 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
HOXC6P09630 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21■□□□□ 0.95
HOXC6P09630 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21■□□□□ 0.95
HOXC6P09630 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21■□□□□ 0.95
HOXC6P09630 AC009065.1-201ENST00000564055 1225 ntBASIC21■□□□□ 0.95
HOXC6P09630 AC120114.3-201ENST00000611923 658 ntBASIC21■□□□□ 0.95
HOXC6P09630 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21■□□□□ 0.95
HOXC6P09630 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21■□□□□ 0.95
HOXC6P09630 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC6P09630 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21■□□□□ 0.95
HOXC6P09630 AL158211.5-201ENST00000623583 2518 ntBASIC21■□□□□ 0.95
HOXC6P09630 IRX1P1-201ENST00000438849 1838 ntBASIC20.99■□□□□ 0.95
HOXC6P09630 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC6P09630 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HOXC6P09630 POM121L3P-201ENST00000419331 1163 ntBASIC20.99■□□□□ 0.95
HOXC6P09630 AL590627.1-203ENST00000421194 1026 ntBASIC20.99■□□□□ 0.95
HOXC6P09630 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXC6P09630 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXC6P09630 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXC6P09630 AC068587.9-201ENST00000641814 219 ntBASIC20.99■□□□□ 0.95
HOXC6P09630 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HOXC6P09630 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC6P09630 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC6P09630 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXC6P09630 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC6P09630 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC6P09630 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC6P09630 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC6P09630 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC6P09630 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HOXC6P09630 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC6P09630 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC6P09630 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms