Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLSTN1O94985 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLSTN1O94985 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLSTN1O94985 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLSTN1O94985 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLSTN1O94985 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CLSTN1O94985 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 AC026471.1-201ENST00000564629 3026 ntBASIC20.6■□□□□ 0.89
CLSTN1O94985 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSTN1O94985 CRYGFP-201ENST00000418459 633 ntBASIC20.6■□□□□ 0.89
CLSTN1O94985 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSTN1O94985 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSTN1O94985 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CLSTN1O94985 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSTN1O94985 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLSTN1O94985 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLSTN1O94985 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.6■□□□□ 0.89
CLSTN1O94985 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSTN1O94985 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSTN1O94985 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSTN1O94985 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 UNC93B2-201ENST00000285383 730 ntBASIC20.59■□□□□ 0.89
CLSTN1O94985 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CLSTN1O94985 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLSTN1O94985 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.59■□□□□ 0.89
CLSTN1O94985 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSTN1O94985 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.59■□□□□ 0.89
CLSTN1O94985 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSTN1O94985 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSTN1O94985 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.59■□□□□ 0.89
CLSTN1O94985 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSTN1O94985 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSTN1O94985 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSTN1O94985 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSTN1O94985 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 KRT8P41-201ENST00000533985 1514 ntBASIC20.58■□□□□ 0.89
CLSTN1O94985 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.58■□□□□ 0.89
CLSTN1O94985 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 AC141586.3-201ENST00000562166 1838 ntBASIC20.58■□□□□ 0.89
CLSTN1O94985 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.58■□□□□ 0.89
CLSTN1O94985 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 TSPY21P-201ENST00000433481 731 ntBASIC20.58■□□□□ 0.89
CLSTN1O94985 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.58■□□□□ 0.89
CLSTN1O94985 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CLSTN1O94985 AC097488.1-201ENST00000507834 756 ntBASIC20.58■□□□□ 0.89
CLSTN1O94985 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.58■□□□□ 0.89
CLSTN1O94985 AL355075.4-201ENST00000554988 638 ntBASIC20.58■□□□□ 0.89
CLSTN1O94985 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 AP000525.1-201ENST00000608286 694 ntBASIC20.58■□□□□ 0.89
CLSTN1O94985 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.58■□□□□ 0.89
CLSTN1O94985 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLSTN1O94985 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CLSTN1O94985 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CLSTN1O94985 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CLSTN1O94985 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSTN1O94985 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
CLSTN1O94985 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSTN1O94985 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSTN1O94985 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CLSTN1O94985 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.57■□□□□ 0.88
CLSTN1O94985 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
CLSTN1O94985 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSTN1O94985 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.57■□□□□ 0.88
CLSTN1O94985 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms