Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PTP4A3O75365 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.78■□□□□ 0.28
PTP4A3O75365 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.78■□□□□ 0.28
PTP4A3O75365 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTP4A3O75365 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.78■□□□□ 0.28
PTP4A3O75365 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTP4A3O75365 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTP4A3O75365 AC008764.6-201ENST00000595909 2069 ntBASIC16.77■□□□□ 0.28
PTP4A3O75365 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.77■□□□□ 0.28
PTP4A3O75365 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.77■□□□□ 0.28
PTP4A3O75365 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 PCDHB18P-201ENST00000524813 2368 ntBASIC16.77■□□□□ 0.28
PTP4A3O75365 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTP4A3O75365 MIR564-202ENST00000385049 94 ntBASIC16.77■□□□□ 0.28
PTP4A3O75365 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PTP4A3O75365 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
PTP4A3O75365 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.77■□□□□ 0.28
PTP4A3O75365 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.77■□□□□ 0.28
PTP4A3O75365 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.77■□□□□ 0.28
PTP4A3O75365 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTP4A3O75365 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.77■□□□□ 0.27
PTP4A3O75365 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PTP4A3O75365 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.77■□□□□ 0.27
PTP4A3O75365 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTP4A3O75365 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTP4A3O75365 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTP4A3O75365 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PTP4A3O75365 AL023284.2-201ENST00000405850 579 ntBASIC16.76■□□□□ 0.27
PTP4A3O75365 FAM197Y1-201ENST00000421178 764 ntBASIC16.76■□□□□ 0.27
PTP4A3O75365 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.76■□□□□ 0.27
PTP4A3O75365 AC020763.4-201ENST00000623414 4170 ntBASIC16.76■□□□□ 0.27
PTP4A3O75365 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTP4A3O75365 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.76■□□□□ 0.27
PTP4A3O75365 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PTP4A3O75365 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PTP4A3O75365 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTP4A3O75365 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.76■□□□□ 0.27
PTP4A3O75365 AC096733.2-201ENST00000609937 1394 ntBASIC16.76■□□□□ 0.27
PTP4A3O75365 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
PTP4A3O75365 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A3O75365 ESPNP-201ENST00000270691 2015 ntBASIC16.75■□□□□ 0.27
PTP4A3O75365 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A3O75365 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A3O75365 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A3O75365 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A3O75365 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.75■□□□□ 0.27
PTP4A3O75365 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.75■□□□□ 0.27
PTP4A3O75365 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.75■□□□□ 0.27
PTP4A3O75365 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.75■□□□□ 0.27
PTP4A3O75365 AC116562.2-201ENST00000507042 360 ntBASIC16.75■□□□□ 0.27
PTP4A3O75365 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.75■□□□□ 0.27
PTP4A3O75365 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A3O75365 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.75■□□□□ 0.27
PTP4A3O75365 CD177P1-201ENST00000606252 935 ntBASIC16.75■□□□□ 0.27
PTP4A3O75365 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A3O75365 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A3O75365 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTP4A3O75365 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PTP4A3O75365 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTP4A3O75365 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms