Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.13■□□□□ 0.97
CCNT1O60563 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNT1O60563 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCNT1O60563 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.12■□□□□ 0.97
CCNT1O60563 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.12■□□□□ 0.97
CCNT1O60563 AC126763.1-201ENST00000552015 2118 ntBASIC21.12■□□□□ 0.97
CCNT1O60563 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.12■□□□□ 0.97
CCNT1O60563 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.12■□□□□ 0.97
CCNT1O60563 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNT1O60563 AC112777.1-201ENST00000540175 1423 ntBASIC21.12■□□□□ 0.97
CCNT1O60563 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
CCNT1O60563 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNT1O60563 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNT1O60563 RCN1P1-201ENST00000400413 996 ntBASIC21.11■□□□□ 0.97
CCNT1O60563 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 KRT18P41-201ENST00000518924 1277 ntBASIC21.11■□□□□ 0.97
CCNT1O60563 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNT1O60563 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 NEK4P2-201ENST00000580004 1012 ntBASIC21.11■□□□□ 0.97
CCNT1O60563 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNT1O60563 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNT1O60563 AC112497.1-201ENST00000624824 639 ntBASIC21.11■□□□□ 0.97
CCNT1O60563 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNT1O60563 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCNT1O60563 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
CCNT1O60563 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 HOXB1-202ENST00000577092 1414 ntBASIC21.11■□□□□ 0.97
CCNT1O60563 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNT1O60563 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCNT1O60563 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNT1O60563 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCNT1O60563 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNT1O60563 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 AC005082.1-201ENST00000413042 2259 ntBASIC21.1■□□□□ 0.97
CCNT1O60563 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNT1O60563 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCNT1O60563 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNT1O60563 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNT1O60563 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CCNT1O60563 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCNT1O60563 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNT1O60563 AC024243.1-201ENST00000609234 778 ntBASIC21.1■□□□□ 0.97
CCNT1O60563 MYC-208ENST00000641036 567 ntBASIC21.1■□□□□ 0.97
CCNT1O60563 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNT1O60563 KRT8P50-201ENST00000562022 1438 ntBASIC21.1■□□□□ 0.97
CCNT1O60563 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNT1O60563 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNT1O60563 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNT1O60563 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCNT1O60563 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNT1O60563 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNT1O60563 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNT1O60563 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.09■□□□□ 0.97
CCNT1O60563 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.09■□□□□ 0.97
CCNT1O60563 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNT1O60563 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms