Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 AL023284.2-201ENST00000405850 579 ntBASIC18.44■□□□□ 0.54
PCDHGA12O60330 NUS1P1-201ENST00000446295 882 ntBASIC18.44■□□□□ 0.54
PCDHGA12O60330 FDX1P1-201ENST00000449115 551 ntBASIC18.44■□□□□ 0.54
PCDHGA12O60330 KRT8P26-201ENST00000534154 1276 ntBASIC18.44■□□□□ 0.54
PCDHGA12O60330 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA12O60330 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA12O60330 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 AP002383.4-201ENST00000442518 975 ntBASIC18.43■□□□□ 0.54
PCDHGA12O60330 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 MIR3180-5-201ENST00000583743 153 ntBASIC18.43■□□□□ 0.54
PCDHGA12O60330 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHGA12O60330 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHGA12O60330 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 AC036111.1-201ENST00000533973 1582 ntBASIC18.42■□□□□ 0.54
PCDHGA12O60330 AL162741.1-201ENST00000565563 1558 ntBASIC18.42■□□□□ 0.54
PCDHGA12O60330 AC093525.10-201ENST00000625130 1569 ntBASIC18.42■□□□□ 0.54
PCDHGA12O60330 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 KRT17P6-201ENST00000453795 1220 ntBASIC18.42■□□□□ 0.54
PCDHGA12O60330 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDHGA12O60330 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
PCDHGA12O60330 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGA12O60330 HLA-F-220ENST00000434407 884 ntBASIC18.41■□□□□ 0.54
PCDHGA12O60330 MCCD1P1-208ENST00000445732 328 ntBASIC18.41■□□□□ 0.54
PCDHGA12O60330 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms