Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 KRT18P23-201ENST00000435622 1283 ntBASIC17.79■□□□□ 0.44
LCMT2O60294 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.79■□□□□ 0.44
LCMT2O60294 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.79■□□□□ 0.44
LCMT2O60294 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 AC005082.1-201ENST00000413042 2259 ntBASIC17.79■□□□□ 0.44
LCMT2O60294 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.79■□□□□ 0.44
LCMT2O60294 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
LCMT2O60294 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCMT2O60294 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LCMT2O60294 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.78■□□□□ 0.44
LCMT2O60294 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LCMT2O60294 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LCMT2O60294 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.78■□□□□ 0.44
LCMT2O60294 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.78■□□□□ 0.44
LCMT2O60294 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.78■□□□□ 0.44
LCMT2O60294 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 AC112777.1-201ENST00000540175 1423 ntBASIC17.78■□□□□ 0.44
LCMT2O60294 KRT8P50-201ENST00000562022 1438 ntBASIC17.78■□□□□ 0.44
LCMT2O60294 HOXB1-202ENST00000577092 1414 ntBASIC17.78■□□□□ 0.44
LCMT2O60294 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LCMT2O60294 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCMT2O60294 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LCMT2O60294 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LCMT2O60294 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.77■□□□□ 0.44
LCMT2O60294 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LCMT2O60294 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.77■□□□□ 0.44
LCMT2O60294 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.77■□□□□ 0.44
LCMT2O60294 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.77■□□□□ 0.44
LCMT2O60294 NEK4P2-201ENST00000580004 1012 ntBASIC17.77■□□□□ 0.44
LCMT2O60294 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 AC024243.1-201ENST00000609234 778 ntBASIC17.77■□□□□ 0.44
LCMT2O60294 AC112497.1-201ENST00000624824 639 ntBASIC17.77■□□□□ 0.44
LCMT2O60294 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.77■□□□□ 0.44
LCMT2O60294 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LCMT2O60294 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCMT2O60294 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.77■□□□□ 0.44
LCMT2O60294 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LCMT2O60294 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.77■□□□□ 0.44
LCMT2O60294 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCMT2O60294 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCMT2O60294 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.77■□□□□ 0.43
LCMT2O60294 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCMT2O60294 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LCMT2O60294 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 AC099343.3-201ENST00000605834 2503 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms