Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RRP8O43159 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 AC020907.5-201ENST00000624372 1936 ntBASIC17.47■□□□□ 0.39
RRP8O43159 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.47■□□□□ 0.39
RRP8O43159 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 AC104417.2-201ENST00000562989 1793 ntBASIC17.46■□□□□ 0.39
RRP8O43159 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RRP8O43159 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RRP8O43159 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 RPS2P28-201ENST00000314255 741 ntBASIC17.46■□□□□ 0.39
RRP8O43159 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.46■□□□□ 0.39
RRP8O43159 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.46■□□□□ 0.39
RRP8O43159 AC104390.1-201ENST00000555663 520 ntBASIC17.46■□□□□ 0.39
RRP8O43159 AC009065.1-201ENST00000564055 1225 ntBASIC17.46■□□□□ 0.39
RRP8O43159 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.46■□□□□ 0.39
RRP8O43159 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.46■□□□□ 0.39
RRP8O43159 AC139887.3-201ENST00000568585 713 ntBASIC17.46■□□□□ 0.39
RRP8O43159 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
RRP8O43159 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.46■□□□□ 0.39
RRP8O43159 AL139424.1-201ENST00000607572 797 ntBASIC17.46■□□□□ 0.39
RRP8O43159 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.46■□□□□ 0.39
RRP8O43159 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
RRP8O43159 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RRP8O43159 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RRP8O43159 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RRP8O43159 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
RRP8O43159 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RRP8O43159 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
RRP8O43159 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.45■□□□□ 0.38
RRP8O43159 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RRP8O43159 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.45■□□□□ 0.38
RRP8O43159 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RRP8O43159 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.45■□□□□ 0.38
RRP8O43159 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.45■□□□□ 0.38
RRP8O43159 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RRP8O43159 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.45■□□□□ 0.38
RRP8O43159 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.45■□□□□ 0.38
RRP8O43159 HMGN1P19-201ENST00000436976 333 ntBASIC17.45■□□□□ 0.38
RRP8O43159 AC073648.2-201ENST00000510116 352 ntBASIC17.45■□□□□ 0.38
RRP8O43159 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.45■□□□□ 0.38
RRP8O43159 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.45■□□□□ 0.38
RRP8O43159 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.45■□□□□ 0.38
RRP8O43159 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.45■□□□□ 0.38
RRP8O43159 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RRP8O43159 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 KRT8P3-201ENST00000519669 1449 ntBASIC17.45■□□□□ 0.38
RRP8O43159 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.45■□□□□ 0.38
RRP8O43159 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RRP8O43159 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.45■□□□□ 0.38
RRP8O43159 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 AC007952.6-201ENST00000573168 2673 ntBASIC17.44■□□□□ 0.38
RRP8O43159 AC003957.1-201ENST00000625108 2673 ntBASIC17.44■□□□□ 0.38
RRP8O43159 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 IGHGP-201ENST00000390555 1178 ntBASIC17.44■□□□□ 0.38
RRP8O43159 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.44■□□□□ 0.38
RRP8O43159 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.44■□□□□ 0.38
RRP8O43159 LINC02084-201ENST00000606069 1096 ntBASIC17.44■□□□□ 0.38
RRP8O43159 AL355385.1-201ENST00000606123 409 ntBASIC17.44■□□□□ 0.38
RRP8O43159 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.44■□□□□ 0.38
RRP8O43159 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.44■□□□□ 0.38
RRP8O43159 AC083906.6-201ENST00000641366 219 ntBASIC17.44■□□□□ 0.38
RRP8O43159 AC079781.4-201ENST00000641908 219 ntBASIC17.44■□□□□ 0.38
RRP8O43159 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms