Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C4orf47A7E2U8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 KRT8P3-201ENST00000519669 1449 ntBASIC18.19■□□□□ 0.5
C4orf47A7E2U8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 AC104390.1-201ENST00000555663 520 ntBASIC18.19■□□□□ 0.5
C4orf47A7E2U8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
C4orf47A7E2U8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.19■□□□□ 0.5
C4orf47A7E2U8 AC243591.1-201ENST00000452967 1364 ntBASIC18.18■□□□□ 0.5
C4orf47A7E2U8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 RPL13AP23-201ENST00000480739 586 ntBASIC18.18■□□□□ 0.5
C4orf47A7E2U8 AP005901.3-202ENST00000581653 237 ntBASIC18.18■□□□□ 0.5
C4orf47A7E2U8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.18■□□□□ 0.5
C4orf47A7E2U8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 SDHAP1-207ENST00000440850 2000 ntBASIC18.17■□□□□ 0.5
C4orf47A7E2U8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 IGHGP-201ENST00000390555 1178 ntBASIC18.17■□□□□ 0.5
C4orf47A7E2U8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 AC005104.2-201ENST00000427818 678 ntBASIC18.17■□□□□ 0.5
C4orf47A7E2U8 RN7SL606P-201ENST00000472779 293 ntBASIC18.17■□□□□ 0.5
C4orf47A7E2U8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 AC073648.2-201ENST00000510116 352 ntBASIC18.17■□□□□ 0.5
C4orf47A7E2U8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.17■□□□□ 0.5
C4orf47A7E2U8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
C4orf47A7E2U8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 KRT8P7-201ENST00000533003 1432 ntBASIC18.16■□□□□ 0.5
C4orf47A7E2U8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 AC091607.1-201ENST00000490318 1060 ntBASIC18.16■□□□□ 0.5
C4orf47A7E2U8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 AL691403.2-201ENST00000618460 490 ntBASIC18.16■□□□□ 0.5
C4orf47A7E2U8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.16■□□□□ 0.5
C4orf47A7E2U8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.16■□□□□ 0.5
C4orf47A7E2U8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms