Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 AC093525.10-201ENST00000625130 1569 ntBASIC20.15■□□□□ 0.82
CCDC66A2RUB6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC66A2RUB6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CCDC66A2RUB6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CCDC66A2RUB6 WIZP1-201ENST00000531444 2299 ntBASIC20.14■□□□□ 0.81
CCDC66A2RUB6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 AL031598.1-201ENST00000561511 1773 ntBASIC20.14■□□□□ 0.81
CCDC66A2RUB6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC66A2RUB6 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.13■□□□□ 0.81
CCDC66A2RUB6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 AC083880.1-201ENST00000608266 535 ntBASIC20.13■□□□□ 0.81
CCDC66A2RUB6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 Z98044.1-201ENST00000632503 1764 ntBASIC20.13■□□□□ 0.81
CCDC66A2RUB6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC66A2RUB6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 ID1-201ENST00000376105 1233 ntBASIC20.12■□□□□ 0.81
CCDC66A2RUB6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 SOX15-203ENST00000570788 1093 ntBASIC20.12■□□□□ 0.81
CCDC66A2RUB6 AC008687.6-201ENST00000596318 630 ntBASIC20.12■□□□□ 0.81
CCDC66A2RUB6 AL109923.1-201ENST00000618799 583 ntBASIC20.12■□□□□ 0.81
CCDC66A2RUB6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
CCDC66A2RUB6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms