Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 AL355877.3-201ENST00000622820 899 ntBASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 ZNF259P1-201ENST00000407656 1365 ntBASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC163A0A0D9SF12 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 AC132008.2-207ENST00000454517 770 ntBASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 AC073648.2-201ENST00000510116 352 ntBASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 TERC-201ENST00000602385 541 ntBASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 AC148477.8-201ENST00000624298 468 ntBASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 AC243591.1-201ENST00000452967 1364 ntBASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC163A0A0D9SF12 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AC007375.3-201ENST00000600936 2314 ntBASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 BX842568.4-201ENST00000421222 227 ntBASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 RPL13AP23-201ENST00000480739 586 ntBASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AC113404.2-201ENST00000507884 177 ntBASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AC068587.9-201ENST00000641814 219 ntBASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC163A0A0D9SF12 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 AC096582.2-201ENST00000510860 516 ntBASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms