Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP16Q9Y5T5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 HEIH-201ENST00000623091 1652 ntBASIC23.77■■□□□ 1.4
USP16Q9Y5T5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 MTMR9LP-203ENST00000426597 1545 ntBASIC23.77■■□□□ 1.4
USP16Q9Y5T5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.77■■□□□ 1.4
USP16Q9Y5T5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 LINC00265-3P-201ENST00000447588 903 ntBASIC23.76■■□□□ 1.39
USP16Q9Y5T5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP16Q9Y5T5 AL049812.1-201ENST00000432563 2267 ntBASIC23.76■■□□□ 1.39
USP16Q9Y5T5 KRT8P50-201ENST00000562022 1438 ntBASIC23.76■■□□□ 1.39
USP16Q9Y5T5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 TOB2P1-201ENST00000469761 992 ntBASIC23.75■■□□□ 1.39
USP16Q9Y5T5 AP000867.3-201ENST00000524675 377 ntBASIC23.75■■□□□ 1.39
USP16Q9Y5T5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 AL732292.2-201ENST00000609649 430 ntBASIC23.75■■□□□ 1.39
USP16Q9Y5T5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP16Q9Y5T5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 TSPY19P-201ENST00000418461 509 ntBASIC23.74■■□□□ 1.39
USP16Q9Y5T5 TSPY18P-201ENST00000441642 509 ntBASIC23.74■■□□□ 1.39
USP16Q9Y5T5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
USP16Q9Y5T5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 AL161938.1-201ENST00000569833 2180 ntBASIC23.73■■□□□ 1.39
USP16Q9Y5T5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP16Q9Y5T5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms