Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 AL359075.1-203ENST00000462729 1002 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 NTF6B-201ENST00000591913 560 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 AC079602.3-201ENST00000623931 403 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 AL138781.2-201ENST00000617896 1843 ntBASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN16Q9Y5I7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 MYLKP1-201ENST00000509077 1580 ntBASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN16Q9Y5I7 AL163051.1-201ENST00000569214 1512 ntBASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 SPDYE13P-201ENST00000445314 798 ntBASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 KRT18P35-201ENST00000510488 1269 ntBASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AL445228.2-201ENST00000605589 952 ntBASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AL590326.2-201ENST00000625139 305 ntBASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 AC005082.1-201ENST00000413042 2259 ntBASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN16Q9Y5I7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AL031133.1-201ENST00000406807 723 ntBASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AC092597.1-201ENST00000487352 616 ntBASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms