Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 AC004264.1-201ENST00000608354 794 ntBASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 AP001271.2-201ENST00000624018 1556 ntBASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 AP006587.1-201ENST00000534129 1502 ntBASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3HCC1Q9Y3T6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.29■■□□□ 1
R3HCC1Q9Y3T6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 AC009237.14-201ENST00000609975 1594 ntBASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 NBPF21P-201ENST00000425093 1451 ntBASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 AC110285.5-201ENST00000611501 352 ntBASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 FP475955.4-201ENST00000623131 1990 ntBASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.28■■□□□ 1
R3HCC1Q9Y3T6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms