Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 Z98044.1-201ENST00000632503 1764 ntBASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDK11AQ9UQ88 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
CDK11AQ9UQ88 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC28.76■■■□□ 2.19
CDK11AQ9UQ88 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 PENK-208ENST00000523051 772 ntTSL 5 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 IGHV3OR16-7-201ENST00000604106 360 ntBASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 AC004263.2-201ENST00000617183 678 ntBASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC28.75■■■□□ 2.19
CDK11AQ9UQ88 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 HLA-A-201ENST00000376802 1334 ntBASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 AC011840.4-201ENST00000578471 627 ntBASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 KRT8P50-201ENST00000562022 1438 ntBASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CDK11AQ9UQ88 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 POM121L3P-201ENST00000419331 1163 ntBASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 PPIE-208ENST00000470213 927 ntTSL 3 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 AC079776.4-201ENST00000511039 504 ntBASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 KRT18P41-201ENST00000518924 1277 ntBASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDK11AQ9UQ88 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 AC091607.1-201ENST00000490318 1060 ntBASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 AC064862.7-201ENST00000604520 867 ntBASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms