Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 PKD1P5-201ENST00000532415 10291 ntBASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NOTCH3Q9UM47 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AC034232.1-201ENST00000506026 1064 ntBASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AC099778.1-201ENST00000568593 1911 ntBASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AL645929.1-201ENST00000420084 975 ntBASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 AC016734.2-201ENST00000624325 1377 ntBASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.38□□□□□ -0.11
NOTCH3Q9UM47 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 AL845331.1-201ENST00000424978 1190 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 KRT17P6-201ENST00000453795 1220 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 AC007952.6-201ENST00000573168 2673 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 AC003957.1-201ENST00000625108 2673 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 RASA4DP-201ENST00000460726 1199 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 SEC1P-202ENST00000473944 940 ntBASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NOTCH3Q9UM47 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NOTCH3Q9UM47 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.36□□□□□ -0.11
NOTCH3Q9UM47 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms