Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NIPSNAP3AQ9UFN0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 RCC2P6-201ENST00000526625 1557 ntBASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 AL162741.1-201ENST00000565563 1558 ntBASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
NIPSNAP3AQ9UFN0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC133041.1-202ENST00000642053 222 ntBASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 AL499627.1-201ENST00000569373 2188 ntBASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NIPSNAP3AQ9UFN0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.8■□□□□ 0.44
NIPSNAP3AQ9UFN0 LTB4R2-202ENST00000528054 3092 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms