Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 TEX21P-204ENST00000641479 1693 ntBASIC19.74■□□□□ 0.75
CHD7Q9P2D1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD7Q9P2D1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 AC006333.2-201ENST00000607957 2099 ntBASIC19.73■□□□□ 0.75
CHD7Q9P2D1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 GUSBP12-201ENST00000513727 720 ntBASIC19.73■□□□□ 0.75
CHD7Q9P2D1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 YBX2P1-201ENST00000394192 760 ntBASIC19.73■□□□□ 0.75
CHD7Q9P2D1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 AC114341.1-201ENST00000618070 349 ntBASIC19.73■□□□□ 0.75
CHD7Q9P2D1 AL353692.3-201ENST00000407031 1396 ntBASIC19.73■□□□□ 0.75
CHD7Q9P2D1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD7Q9P2D1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 AC004967.1-201ENST00000453589 447 ntBASIC19.72■□□□□ 0.75
CHD7Q9P2D1 AL356488.2-201ENST00000602755 427 ntBASIC19.72■□□□□ 0.75
CHD7Q9P2D1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 LINC01006-201ENST00000333319 2292 ntBASIC19.72■□□□□ 0.75
CHD7Q9P2D1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 RCC2P3-201ENST00000418112 1537 ntBASIC19.72■□□□□ 0.75
CHD7Q9P2D1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.72■□□□□ 0.75
CHD7Q9P2D1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 DNAJB3-202ENST00000449667 1266 ntBASIC19.71■□□□□ 0.75
CHD7Q9P2D1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 SART3-203ENST00000546611 1184 ntBASIC19.71■□□□□ 0.75
CHD7Q9P2D1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 AC024563.2-201ENST00000603282 481 ntBASIC19.71■□□□□ 0.75
CHD7Q9P2D1 AP001269.4-201ENST00000609611 512 ntBASIC19.71■□□□□ 0.75
CHD7Q9P2D1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 POM121L3P-201ENST00000419331 1163 ntBASIC19.71■□□□□ 0.75
CHD7Q9P2D1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD7Q9P2D1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD7Q9P2D1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms