Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AC063952.2-201ENST00000498792 1227 ntBASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AC087388.1-201ENST00000571370 1112 ntBASIC17.3■□□□□ 0.36
HPF1Q9NWY4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AC011558.1-201ENST00000623459 338 ntBASIC17.3■□□□□ 0.36
HPF1Q9NWY4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 MIR3180-5-201ENST00000583743 153 ntBASIC17.29■□□□□ 0.36
HPF1Q9NWY4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 AC018445.3-201ENST00000624177 1945 ntBASIC17.29■□□□□ 0.36
HPF1Q9NWY4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPF1Q9NWY4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 AC036111.1-201ENST00000533973 1582 ntBASIC17.28■□□□□ 0.36
HPF1Q9NWY4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 HOMER2P1-201ENST00000455653 964 ntBASIC17.28■□□□□ 0.36
HPF1Q9NWY4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPF1Q9NWY4 AL512353.2-201ENST00000448759 1962 ntBASIC17.28■□□□□ 0.36
HPF1Q9NWY4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HPF1Q9NWY4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HPF1Q9NWY4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.27■□□□□ 0.36
HPF1Q9NWY4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HPF1Q9NWY4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms