Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 AP000523.1-201ENST00000398242 1049 ntBASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 WWOX-216ENST00000569818 525 ntBASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHAF3Q9NRP4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 AC113347.1-201ENST00000413321 391 ntBASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 AC006333.2-201ENST00000607957 2099 ntBASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SDHAF3Q9NRP4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 MIR564-202ENST00000385049 94 ntBASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 MYC-208ENST00000641036 567 ntBASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 AP000974.1-201ENST00000623909 2387 ntBASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHAF3Q9NRP4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 MIR4674-201ENST00000582457 87 ntBASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 CR769767.2-201ENST00000622735 460 ntBASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 KRT8P7-201ENST00000533003 1432 ntBASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHAF3Q9NRP4 AC008556.1-201ENST00000610908 2040 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms