Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZFYVE28Q9HCC9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.27■■□□□ 1
ZFYVE28Q9HCC9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
ZFYVE28Q9HCC9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZFYVE28Q9HCC9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ZFYVE28Q9HCC9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ZFYVE28Q9HCC9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 FGFR3P6-201ENST00000457012 610 ntBASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 AC099778.1-201ENST00000568593 1911 ntBASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZFYVE28Q9HCC9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 RBM17P3-201ENST00000417687 1192 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 HMGN1P19-201ENST00000436976 333 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 HNRNPDP1-201ENST00000439535 754 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 PGAM5P1-201ENST00000518923 814 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 MTDHP3-201ENST00000594186 672 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 AL139424.1-201ENST00000607572 797 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 AC055717.3-201ENST00000622967 595 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 GABARAPL3-202ENST00000624044 1851 ntBASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.24■□□□□ 0.99
ZFYVE28Q9HCC9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 AC027601.4-201ENST00000611259 610 ntBASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.23■□□□□ 0.99
ZFYVE28Q9HCC9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZFYVE28Q9HCC9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms