Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.36■□□□□ 0.85
HIPK3Q9H422 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK3Q9H422 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
HIPK3Q9H422 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 SLC25A1P1-201ENST00000528351 927 ntBASIC20.35■□□□□ 0.85
HIPK3Q9H422 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 AC011840.4-201ENST00000578471 627 ntBASIC20.35■□□□□ 0.85
HIPK3Q9H422 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 KRT8P32-201ENST00000512863 1461 ntBASIC20.35■□□□□ 0.85
HIPK3Q9H422 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.35■□□□□ 0.85
HIPK3Q9H422 AIRN-201ENST00000601203 4374 ntBASIC20.35■□□□□ 0.85
HIPK3Q9H422 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK3Q9H422 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HIPK3Q9H422 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
HIPK3Q9H422 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.34■□□□□ 0.85
HIPK3Q9H422 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.34■□□□□ 0.85
HIPK3Q9H422 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
HIPK3Q9H422 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
HIPK3Q9H422 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK3Q9H422 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK3Q9H422 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK3Q9H422 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK3Q9H422 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK3Q9H422 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.33■□□□□ 0.85
HIPK3Q9H422 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK3Q9H422 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.33■□□□□ 0.84
HIPK3Q9H422 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIPK3Q9H422 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HIPK3Q9H422 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HIPK3Q9H422 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.32■□□□□ 0.84
HIPK3Q9H422 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK3Q9H422 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK3Q9H422 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK3Q9H422 AL031284.1-201ENST00000419297 478 ntBASIC20.32■□□□□ 0.84
HIPK3Q9H422 POM121L3P-201ENST00000419331 1163 ntBASIC20.32■□□□□ 0.84
HIPK3Q9H422 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 KRT18P67-201ENST00000432816 1264 ntBASIC20.32■□□□□ 0.84
HIPK3Q9H422 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK3Q9H422 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK3Q9H422 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK3Q9H422 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
HIPK3Q9H422 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms