Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 AL357033.4-201ENST00000617703 1807 ntBASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH11XQ9BZA7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 AL590627.1-203ENST00000421194 1026 ntBASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 KRT18P41-201ENST00000518924 1277 ntBASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 AC064862.7-201ENST00000604520 867 ntBASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.14■■□□□ 1.46
PCDH11XQ9BZA7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH11XQ9BZA7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH11XQ9BZA7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH11XQ9BZA7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDH11XQ9BZA7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDH11XQ9BZA7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 POM121L3P-201ENST00000419331 1163 ntBASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 MTMR9LP-203ENST00000426597 1545 ntBASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH11XQ9BZA7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AP000593.1-201ENST00000393668 712 ntBASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AP001005.1-201ENST00000571755 1248 ntBASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 AL773604.1-201ENST00000617417 272 ntBASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH11XQ9BZA7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH11XQ9BZA7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms