Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.2■□□□□ 0.66
NOTCH4Q99466 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOTCH4Q99466 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH4Q99466 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH4Q99466 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH4Q99466 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 SAPCD2P3-201ENST00000455031 850 ntBASIC19.19■□□□□ 0.66
NOTCH4Q99466 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.19■□□□□ 0.66
NOTCH4Q99466 AL353801.3-201ENST00000609898 542 ntBASIC19.19■□□□□ 0.66
NOTCH4Q99466 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH4Q99466 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOTCH4Q99466 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.19■□□□□ 0.66
NOTCH4Q99466 GUSBP12-201ENST00000513727 720 ntBASIC19.18■□□□□ 0.66
NOTCH4Q99466 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 AC099343.3-201ENST00000605834 2503 ntBASIC19.18■□□□□ 0.66
NOTCH4Q99466 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.18■□□□□ 0.66
NOTCH4Q99466 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NOTCH4Q99466 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOTCH4Q99466 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOTCH4Q99466 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NOTCH4Q99466 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOTCH4Q99466 AC007952.6-201ENST00000573168 2673 ntBASIC19.16■□□□□ 0.66
NOTCH4Q99466 AC003957.1-201ENST00000625108 2673 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms