Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 FGFR3P6-201ENST00000457012 610 ntBASIC18.25■□□□□ 0.51
CFAP54Q96N23 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 AC124864.1-201ENST00000623408 392 ntBASIC18.25■□□□□ 0.51
CFAP54Q96N23 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 Z83851.2-201ENST00000609564 659 ntBASIC18.25■□□□□ 0.51
CFAP54Q96N23 AC093028.1-201ENST00000622998 982 ntBASIC18.25■□□□□ 0.51
CFAP54Q96N23 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP54Q96N23 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 AC005225.4-201ENST00000557330 545 ntBASIC18.24■□□□□ 0.51
CFAP54Q96N23 SNHG9-202ENST00000564014 471 ntBASIC18.24■□□□□ 0.51
CFAP54Q96N23 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 IGHV3-41-201ENST00000613121 348 ntBASIC18.24■□□□□ 0.51
CFAP54Q96N23 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 AL008721.1-201ENST00000609964 604 ntBASIC18.24■□□□□ 0.51
CFAP54Q96N23 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP54Q96N23 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP54Q96N23 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 HLA-J-201ENST00000462773 1622 ntBASIC18.23■□□□□ 0.51
CFAP54Q96N23 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 AC093512.1-201ENST00000617969 520 ntBASIC18.23■□□□□ 0.51
CFAP54Q96N23 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP54Q96N23 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CFAP54Q96N23 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 AFG3L1P-217ENST00000557444 2447 ntBASIC18.22■□□□□ 0.51
CFAP54Q96N23 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CFAP54Q96N23 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP54Q96N23 RN7SL606P-201ENST00000472779 293 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms