Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 AL355075.4-201ENST00000554988 638 ntBASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 KRT8P7-201ENST00000533003 1432 ntBASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 KRT8P50-201ENST00000562022 1438 ntBASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 HOXB1-202ENST00000577092 1414 ntBASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM5Q96HC4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 TSPY14P-201ENST00000303979 915 ntBASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 BX088651.1-201ENST00000540551 451 ntBASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 AC116562.4-202ENST00000641738 218 ntBASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 ABALON-201ENST00000629058 1903 ntBASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 AC036111.1-201ENST00000533973 1582 ntBASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDLIM5Q96HC4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PDLIM5Q96HC4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDLIM5Q96HC4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 AC010653.2-201ENST00000623505 997 ntBASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM5Q96HC4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 MIR1238-201ENST00000408483 83 ntBASIC18.19■□□□□ 0.5
PDLIM5Q96HC4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms