Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC092865.7-201ENST00000641832 219 ntBASIC19.11■□□□□ 0.65
RTL3Q8N8U3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.11■□□□□ 0.65
RTL3Q8N8U3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 AP000593.1-201ENST00000393668 712 ntBASIC19.1■□□□□ 0.65
RTL3Q8N8U3 RCN1P1-201ENST00000400413 996 ntBASIC19.1■□□□□ 0.65
RTL3Q8N8U3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 BX664615.1-201ENST00000443558 458 ntBASIC19.1■□□□□ 0.65
RTL3Q8N8U3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTL3Q8N8U3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 KRT8P50-201ENST00000562022 1438 ntBASIC19.09■□□□□ 0.65
RTL3Q8N8U3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL3Q8N8U3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL3Q8N8U3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.08■□□□□ 0.64
RTL3Q8N8U3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 COX11P1-201ENST00000489116 835 ntBASIC19.08■□□□□ 0.64
RTL3Q8N8U3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.08■□□□□ 0.64
RTL3Q8N8U3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms