Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
ABCA6Q8N139 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC27.59■■■□□ 2.01
ABCA6Q8N139 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC27.58■■■□□ 2.01
ABCA6Q8N139 Z98044.1-201ENST00000632503 1764 ntBASIC27.58■■■□□ 2.01
ABCA6Q8N139 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ABCA6Q8N139 UPF3AP3-201ENST00000420996 769 ntBASIC27.58■■■□□ 2.01
ABCA6Q8N139 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC27.58■■■□□ 2.01
ABCA6Q8N139 URGCP-206ENST00000446958 365 ntTSL 2 BASIC27.58■■■□□ 2.01
ABCA6Q8N139 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
ABCA6Q8N139 AC012640.2-201ENST00000561606 901 ntBASIC27.58■■■□□ 2.01
ABCA6Q8N139 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC27.58■■■□□ 2.01
ABCA6Q8N139 AL139424.1-201ENST00000607572 797 ntBASIC27.58■■■□□ 2.01
ABCA6Q8N139 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
ABCA6Q8N139 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
ABCA6Q8N139 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
ABCA6Q8N139 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ABCA6Q8N139 AC104109.2-201ENST00000602919 1418 ntBASIC27.58■■■□□ 2
ABCA6Q8N139 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
ABCA6Q8N139 PAN3-AS1-201ENST00000563843 1351 ntBASIC27.57■■■□□ 2
ABCA6Q8N139 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ABCA6Q8N139 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
ABCA6Q8N139 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
ABCA6Q8N139 FAM197Y3-203ENST00000618346 717 ntBASIC27.57■■■□□ 2
ABCA6Q8N139 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ABCA6Q8N139 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC27.57■■■□□ 2
ABCA6Q8N139 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC27.57■■■□□ 2
ABCA6Q8N139 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC27.57■■■□□ 2
ABCA6Q8N139 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC27.57■■■□□ 2
ABCA6Q8N139 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ABCA6Q8N139 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC27.57■■■□□ 2
ABCA6Q8N139 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC27.57■■■□□ 2
ABCA6Q8N139 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC27.56■■■□□ 2
ABCA6Q8N139 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC27.56■■■□□ 2
ABCA6Q8N139 SART3-203ENST00000546611 1184 ntBASIC27.56■■■□□ 2
ABCA6Q8N139 AP001160.2-201ENST00000596071 487 ntBASIC27.56■■■□□ 2
ABCA6Q8N139 AL356488.2-201ENST00000602755 427 ntBASIC27.56■■■□□ 2
ABCA6Q8N139 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC27.56■■■□□ 2
ABCA6Q8N139 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC27.56■■■□□ 2
ABCA6Q8N139 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
ABCA6Q8N139 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC27.56■■■□□ 2
ABCA6Q8N139 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC27.56■■■□□ 2
ABCA6Q8N139 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC27.56■■■□□ 2
ABCA6Q8N139 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC27.56■■■□□ 2
ABCA6Q8N139 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
ABCA6Q8N139 AC022898.2-201ENST00000616822 1312 ntBASIC27.55■■■□□ 2
ABCA6Q8N139 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ABCA6Q8N139 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
ABCA6Q8N139 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ABCA6Q8N139 YBX2P1-201ENST00000394192 760 ntBASIC27.55■■■□□ 2
ABCA6Q8N139 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
ABCA6Q8N139 AC113404.2-201ENST00000507884 177 ntBASIC27.55■■■□□ 2
ABCA6Q8N139 AC112777.1-201ENST00000540175 1423 ntBASIC27.55■■■□□ 2
ABCA6Q8N139 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
ABCA6Q8N139 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
ABCA6Q8N139 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
ABCA6Q8N139 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
ABCA6Q8N139 AC092667.1-201ENST00000434301 2586 ntBASIC27.54■■■□□ 2
ABCA6Q8N139 MED16-201ENST00000269814 1199 ntTSL 5 BASIC27.54■■■□□ 2
ABCA6Q8N139 MEG3-211ENST00000452514 461 ntTSL 3 BASIC27.54■■■□□ 2
ABCA6Q8N139 AC132008.2-207ENST00000454517 770 ntBASIC27.54■■■□□ 2
ABCA6Q8N139 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC27.54■■■□□ 2
ABCA6Q8N139 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
ABCA6Q8N139 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ABCA6Q8N139 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC27.54■■■□□ 2
ABCA6Q8N139 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ABCA6Q8N139 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
ABCA6Q8N139 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 RCN1P2-201ENST00000398357 915 ntBASIC27.53■■■□□ 2
ABCA6Q8N139 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC27.53■■■□□ 2
ABCA6Q8N139 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC27.53■■■□□ 2
ABCA6Q8N139 AC021087.4-201ENST00000563761 564 ntBASIC27.53■■■□□ 2
ABCA6Q8N139 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC27.53■■■□□ 2
ABCA6Q8N139 AL138831.2-201ENST00000606564 490 ntBASIC27.53■■■□□ 2
ABCA6Q8N139 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC27.53■■■□□ 2
ABCA6Q8N139 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC27.53■■■□□ 2
ABCA6Q8N139 MTMR9LP-203ENST00000426597 1545 ntBASIC27.53■■■□□ 2
ABCA6Q8N139 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
ABCA6Q8N139 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC27.52■■■□□ 2
ABCA6Q8N139 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC27.52■■■□□ 2
ABCA6Q8N139 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
ABCA6Q8N139 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms