Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 Z98044.1-201ENST00000632503 1764 ntBASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPAS4Q8IUM7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 SLC25A6P4-201ENST00000586535 553 ntBASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 NSUN5P1-202ENST00000421140 1535 ntBASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 NSUN5P2-203ENST00000457352 1529 ntBASIC19.97■□□□□ 0.79
NPAS4Q8IUM7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 AL022342.1-201ENST00000400363 863 ntBASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS4Q8IUM7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 KRT8P50-201ENST00000562022 1438 ntBASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.95■□□□□ 0.78
NPAS4Q8IUM7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 AP005901.3-202ENST00000581653 237 ntBASIC19.94■□□□□ 0.78
NPAS4Q8IUM7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms