Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC62Q6P9F0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC62Q6P9F0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
CCDC62Q6P9F0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 MIR3180-4-201ENST00000582223 153 ntBASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC62Q6P9F0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 TSPY22P-201ENST00000427496 604 ntBASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 MIR3652-201ENST00000579335 131 ntBASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 AL032819.2-201ENST00000624543 2162 ntBASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC62Q6P9F0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AC007952.6-201ENST00000573168 2673 ntBASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AC003957.1-201ENST00000625108 2673 ntBASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 CHCHD2P8-201ENST00000429873 447 ntBASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 PVRIG2P-201ENST00000435460 978 ntBASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AP002414.4-201ENST00000589764 1148 ntBASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC62Q6P9F0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 AC093484.2-201ENST00000580996 2166 ntBASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms