Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 Z83836.1-201ENST00000624605 1642 ntBASIC21.8■■□□□ 1.08
CERKLQ49MI3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CERKLQ49MI3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
CERKLQ49MI3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 AP003733.1-201ENST00000491725 852 ntBASIC21.79■■□□□ 1.08
CERKLQ49MI3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 AC005332.3-201ENST00000589904 676 ntBASIC21.79■■□□□ 1.08
CERKLQ49MI3 AL049812.1-201ENST00000432563 2267 ntBASIC21.79■■□□□ 1.08
CERKLQ49MI3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.79■■□□□ 1.08
CERKLQ49MI3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 KRT8P50-201ENST00000562022 1438 ntBASIC21.79■■□□□ 1.08
CERKLQ49MI3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 KRT18P1-202ENST00000452408 1331 ntBASIC21.79■■□□□ 1.08
CERKLQ49MI3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CERKLQ49MI3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 AC005332.7-201ENST00000614046 2005 ntBASIC21.78■■□□□ 1.08
CERKLQ49MI3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CERKLQ49MI3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.78■■□□□ 1.08
CERKLQ49MI3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CERKLQ49MI3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CERKLQ49MI3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 AC009065.1-201ENST00000564055 1225 ntBASIC21.77■■□□□ 1.08
CERKLQ49MI3 PRELID1P1-202ENST00000567272 903 ntBASIC21.77■■□□□ 1.08
CERKLQ49MI3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CERKLQ49MI3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CERKLQ49MI3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.77■■□□□ 1.08
CERKLQ49MI3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.77■■□□□ 1.07
CERKLQ49MI3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CERKLQ49MI3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CERKLQ49MI3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CERKLQ49MI3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.76■■□□□ 1.07
CERKLQ49MI3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CERKLQ49MI3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CERKLQ49MI3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.76■■□□□ 1.07
CERKLQ49MI3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CERKLQ49MI3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.76■■□□□ 1.07
CERKLQ49MI3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.76■■□□□ 1.07
CERKLQ49MI3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CERKLQ49MI3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms