Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 AC099778.1-201ENST00000568593 1911 ntBASIC32.77■■■□□ 2.84
HMGXB3Q12766 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 RAB17-203ENST00000409576 466 ntTSL 3 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC32.77■■■□□ 2.84
HMGXB3Q12766 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
HMGXB3Q12766 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC32.76■■■□□ 2.84
HMGXB3Q12766 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.83
HMGXB3Q12766 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
HMGXB3Q12766 STK25-234ENST00000535007 2459 ntTSL 2 BASIC32.76■■■□□ 2.83
HMGXB3Q12766 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
HMGXB3Q12766 AC112482.1-201ENST00000492080 688 ntBASIC32.76■■■□□ 2.83
HMGXB3Q12766 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC32.76■■■□□ 2.83
HMGXB3Q12766 CYGB-205ENST00000590175 830 ntTSL 3 BASIC32.76■■■□□ 2.83
HMGXB3Q12766 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC32.76■■■□□ 2.83
HMGXB3Q12766 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC32.75■■■□□ 2.83
HMGXB3Q12766 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
HMGXB3Q12766 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
HMGXB3Q12766 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
HMGXB3Q12766 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC32.75■■■□□ 2.83
HMGXB3Q12766 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC32.75■■■□□ 2.83
HMGXB3Q12766 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC32.75■■■□□ 2.83
HMGXB3Q12766 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC32.75■■■□□ 2.83
HMGXB3Q12766 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
HMGXB3Q12766 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
HMGXB3Q12766 Z98044.1-201ENST00000632503 1764 ntBASIC32.75■■■□□ 2.83
HMGXB3Q12766 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC32.75■■■□□ 2.83
HMGXB3Q12766 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
HMGXB3Q12766 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC32.74■■■□□ 2.83
HMGXB3Q12766 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
HMGXB3Q12766 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC32.74■■■□□ 2.83
HMGXB3Q12766 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
HMGXB3Q12766 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
HMGXB3Q12766 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC32.74■■■□□ 2.83
HMGXB3Q12766 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC32.74■■■□□ 2.83
HMGXB3Q12766 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC32.74■■■□□ 2.83
HMGXB3Q12766 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC32.74■■■□□ 2.83
HMGXB3Q12766 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC32.73■■■□□ 2.83
HMGXB3Q12766 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC32.73■■■□□ 2.83
HMGXB3Q12766 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC32.73■■■□□ 2.83
HMGXB3Q12766 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC32.73■■■□□ 2.83
HMGXB3Q12766 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC32.73■■■□□ 2.83
HMGXB3Q12766 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
HMGXB3Q12766 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
HMGXB3Q12766 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
HMGXB3Q12766 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
HMGXB3Q12766 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
HMGXB3Q12766 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 RFPL4AP1-201ENST00000530883 850 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 MIR3197-201ENST00000582241 73 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
HMGXB3Q12766 LINC01521-201ENST00000504184 1943 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
HMGXB3Q12766 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 ABCD1P5-201ENST00000445663 754 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 CYMP-203ENST00000474680 1263 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
HMGXB3Q12766 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC32.72■■■□□ 2.83
HMGXB3Q12766 AC083906.6-201ENST00000641366 219 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 AC079781.4-201ENST00000641908 219 ntBASIC32.72■■■□□ 2.83
HMGXB3Q12766 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC32.71■■■□□ 2.83
HMGXB3Q12766 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC32.71■■■□□ 2.83
HMGXB3Q12766 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC32.71■■■□□ 2.83
HMGXB3Q12766 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
HMGXB3Q12766 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
HMGXB3Q12766 AC009533.2-201ENST00000543664 586 ntBASIC32.71■■■□□ 2.83
HMGXB3Q12766 RPS29-206ENST00000557111 488 ntTSL 2 BASIC32.71■■■□□ 2.83
HMGXB3Q12766 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
HMGXB3Q12766 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
HMGXB3Q12766 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
HMGXB3Q12766 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
HMGXB3Q12766 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC32.7■■■□□ 2.83
HMGXB3Q12766 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC32.7■■■□□ 2.83
HMGXB3Q12766 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
HMGXB3Q12766 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
HMGXB3Q12766 RPS8P6-201ENST00000426177 609 ntBASIC32.7■■■□□ 2.83
HMGXB3Q12766 RNA5SP416-201ENST00000516838 111 ntBASIC32.7■■■□□ 2.83
HMGXB3Q12766 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC32.7■■■□□ 2.83
HMGXB3Q12766 CFL1-212ENST00000531413 636 ntTSL 3 BASIC32.7■■■□□ 2.83
HMGXB3Q12766 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC32.7■■■□□ 2.82
HMGXB3Q12766 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
HMGXB3Q12766 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
HMGXB3Q12766 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC32.7■■■□□ 2.82
HMGXB3Q12766 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
HMGXB3Q12766 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
HMGXB3Q12766 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC32.69■■■□□ 2.82
HMGXB3Q12766 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC32.69■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms