Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CDKN2DP55273 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.44■□□□□ 0.54
CDKN2DP55273 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKN2DP55273 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.44■□□□□ 0.54
CDKN2DP55273 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.44■□□□□ 0.54
CDKN2DP55273 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.44■□□□□ 0.54
CDKN2DP55273 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDKN2DP55273 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CDKN2DP55273 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.44■□□□□ 0.54
CDKN2DP55273 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.43■□□□□ 0.54
CDKN2DP55273 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDKN2DP55273 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDKN2DP55273 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDKN2DP55273 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.43■□□□□ 0.54
CDKN2DP55273 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.43■□□□□ 0.54
CDKN2DP55273 MIR4674-201ENST00000582457 87 ntBASIC18.43■□□□□ 0.54
CDKN2DP55273 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.43■□□□□ 0.54
CDKN2DP55273 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.43■□□□□ 0.54
CDKN2DP55273 MYC-208ENST00000641036 567 ntBASIC18.43■□□□□ 0.54
CDKN2DP55273 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.43■□□□□ 0.54
CDKN2DP55273 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.43■□□□□ 0.54
CDKN2DP55273 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.43■□□□□ 0.54
CDKN2DP55273 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CDKN2DP55273 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDKN2DP55273 AC018470.1-201ENST00000624790 3129 ntBASIC18.43■□□□□ 0.54
CDKN2DP55273 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
CDKN2DP55273 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.42■□□□□ 0.54
CDKN2DP55273 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.42■□□□□ 0.54
CDKN2DP55273 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.42■□□□□ 0.54
CDKN2DP55273 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 MIR564-202ENST00000385049 94 ntBASIC18.42■□□□□ 0.54
CDKN2DP55273 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 MCCD1P1-208ENST00000445732 328 ntBASIC18.42■□□□□ 0.54
CDKN2DP55273 RBM17P1-201ENST00000453646 1190 ntBASIC18.42■□□□□ 0.54
CDKN2DP55273 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.42■□□□□ 0.54
CDKN2DP55273 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.42■□□□□ 0.54
CDKN2DP55273 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKN2DP55273 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDKN2DP55273 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKN2DP55273 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDKN2DP55273 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKN2DP55273 AC079598.2-202ENST00000546624 1451 ntBASIC18.41■□□□□ 0.54
CDKN2DP55273 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKN2DP55273 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDKN2DP55273 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKN2DP55273 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKN2DP55273 CA15P1-201ENST00000481698 905 ntBASIC18.41■□□□□ 0.54
CDKN2DP55273 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.41■□□□□ 0.54
CDKN2DP55273 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.41■□□□□ 0.54
CDKN2DP55273 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms