Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.01■□□□□ 0.95
CENPFP49454 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CENPFP49454 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPFP49454 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.01■□□□□ 0.95
CENPFP49454 AL109659.2-201ENST00000606809 1674 ntBASIC21.01■□□□□ 0.95
CENPFP49454 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21■□□□□ 0.95
CENPFP49454 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21■□□□□ 0.95
CENPFP49454 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21■□□□□ 0.95
CENPFP49454 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21■□□□□ 0.95
CENPFP49454 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CENPFP49454 AC009237.14-201ENST00000609975 1594 ntBASIC21■□□□□ 0.95
CENPFP49454 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21■□□□□ 0.95
CENPFP49454 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21■□□□□ 0.95
CENPFP49454 VENTXP7-201ENST00000475503 772 ntBASIC21■□□□□ 0.95
CENPFP49454 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21■□□□□ 0.95
CENPFP49454 AL162377.1-201ENST00000618844 1793 ntBASIC21■□□□□ 0.95
CENPFP49454 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CENPFP49454 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPFP49454 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21■□□□□ 0.95
CENPFP49454 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPFP49454 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21■□□□□ 0.95
CENPFP49454 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
CENPFP49454 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21■□□□□ 0.95
CENPFP49454 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21■□□□□ 0.95
CENPFP49454 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CENPFP49454 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CENPFP49454 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.99■□□□□ 0.95
CENPFP49454 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
CENPFP49454 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.99■□□□□ 0.95
CENPFP49454 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CENPFP49454 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.99■□□□□ 0.95
CENPFP49454 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.99■□□□□ 0.95
CENPFP49454 HTR5BP-201ENST00000430851 1154 ntBASIC20.99■□□□□ 0.95
CENPFP49454 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.99■□□□□ 0.95
CENPFP49454 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.99■□□□□ 0.95
CENPFP49454 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.99■□□□□ 0.95
CENPFP49454 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.99■□□□□ 0.95
CENPFP49454 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.99■□□□□ 0.95
CENPFP49454 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.99■□□□□ 0.95
CENPFP49454 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CENPFP49454 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPFP49454 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CENPFP49454 AC211486.1-202ENST00000416371 468 ntBASIC20.99■□□□□ 0.95
CENPFP49454 AC211476.1-201ENST00000503899 468 ntBASIC20.99■□□□□ 0.95
CENPFP49454 IGHV3-41-201ENST00000613121 348 ntBASIC20.99■□□□□ 0.95
CENPFP49454 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.98■□□□□ 0.95
CENPFP49454 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CENPFP49454 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CENPFP49454 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.98■□□□□ 0.95
CENPFP49454 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CENPFP49454 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 AC005082.1-201ENST00000413042 2259 ntBASIC20.98■□□□□ 0.95
CENPFP49454 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.98■□□□□ 0.95
CENPFP49454 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.98■□□□□ 0.95
CENPFP49454 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPFP49454 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.98■□□□□ 0.95
CENPFP49454 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPFP49454 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPFP49454 AC132008.2-207ENST00000454517 770 ntBASIC20.97■□□□□ 0.95
CENPFP49454 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.97■□□□□ 0.95
CENPFP49454 SCARNA2-201ENST00000458748 420 ntBASIC20.97■□□□□ 0.95
CENPFP49454 AC093909.1-201ENST00000504731 1122 ntBASIC20.97■□□□□ 0.95
CENPFP49454 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CENPFP49454 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.97■□□□□ 0.95
CENPFP49454 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPFP49454 NUS1P2-201ENST00000417358 873 ntBASIC20.97■□□□□ 0.95
CENPFP49454 ZNF815P-204ENST00000434898 1737 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms