Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MMP23A-201ENST00000234610 1017 ntBASIC17.99■□□□□ 0.47
SLC6A12P48065 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
SLC6A12P48065 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC6A12P48065 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC6A12P48065 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A12P48065 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC6A12P48065 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC6A12P48065 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC6A12P48065 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.99■□□□□ 0.47
SLC6A12P48065 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC6A12P48065 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC6A12P48065 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC6A12P48065 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC6A12P48065 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SLC6A12P48065 HOXB1-202ENST00000577092 1414 ntBASIC17.98■□□□□ 0.47
SLC6A12P48065 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SLC6A12P48065 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC6A12P48065 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC6A12P48065 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC6A12P48065 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC6A12P48065 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.98■□□□□ 0.47
SLC6A12P48065 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC6A12P48065 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SLC6A12P48065 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
SLC6A12P48065 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC6A12P48065 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A12P48065 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC6A12P48065 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC6A12P48065 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC6A12P48065 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A12P48065 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC6A12P48065 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A12P48065 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A12P48065 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 NAPSB-206ENST00000562112 1266 ntBASIC17.97■□□□□ 0.47
SLC6A12P48065 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC6A12P48065 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC6A12P48065 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC6A12P48065 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A12P48065 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A12P48065 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A12P48065 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A12P48065 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A12P48065 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A12P48065 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC6A12P48065 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC6A12P48065 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 AL390961.4-201ENST00000623958 2535 ntBASIC17.96■□□□□ 0.47
SLC6A12P48065 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC6A12P48065 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SLC6A12P48065 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A12P48065 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms