Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.71■□□□□ 0.43
RORAP35398 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RORAP35398 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.71■□□□□ 0.42
RORAP35398 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.7■□□□□ 0.42
RORAP35398 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.7■□□□□ 0.42
RORAP35398 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 AC112497.1-201ENST00000624824 639 ntBASIC17.7■□□□□ 0.42
RORAP35398 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.7■□□□□ 0.42
RORAP35398 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.7■□□□□ 0.42
RORAP35398 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 AL020996.1-203ENST00000536896 2307 ntBASIC17.7■□□□□ 0.42
RORAP35398 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.7■□□□□ 0.42
RORAP35398 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.7■□□□□ 0.42
RORAP35398 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RORAP35398 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RORAP35398 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 AC008556.1-201ENST00000610908 2040 ntBASIC17.69■□□□□ 0.42
RORAP35398 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.69■□□□□ 0.42
RORAP35398 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.69■□□□□ 0.42
RORAP35398 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RORAP35398 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.69■□□□□ 0.42
RORAP35398 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.69■□□□□ 0.42
RORAP35398 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.69■□□□□ 0.42
RORAP35398 AC092597.1-201ENST00000487352 616 ntBASIC17.69■□□□□ 0.42
RORAP35398 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
RORAP35398 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.69■□□□□ 0.42
RORAP35398 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RORAP35398 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RORAP35398 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RORAP35398 KRT8P32-201ENST00000512863 1461 ntBASIC17.69■□□□□ 0.42
RORAP35398 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RORAP35398 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.68■□□□□ 0.42
RORAP35398 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.68■□□□□ 0.42
RORAP35398 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RORAP35398 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.68■□□□□ 0.42
RORAP35398 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RORAP35398 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RORAP35398 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms