Protein–RNA interactions for Protein: P35222

CTNNB1, Catenin beta-1, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1P35222 AL591684.3-201ENST00000605187 298 ntBASIC19.75■□□□□ 0.75
CTNNB1P35222 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNB1P35222 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNB1P35222 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNB1P35222 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNB1P35222 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTNNB1P35222 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CTNNB1P35222 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNNB1P35222 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNNB1P35222 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 AF186996.4-201ENST00000467186 377 ntBASIC19.74■□□□□ 0.75
CTNNB1P35222 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNNB1P35222 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.74■□□□□ 0.75
CTNNB1P35222 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.74■□□□□ 0.75
CTNNB1P35222 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTNNB1P35222 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.74■□□□□ 0.75
CTNNB1P35222 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.74■□□□□ 0.75
CTNNB1P35222 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNNB1P35222 FEM1AP3-201ENST00000403722 1741 ntBASIC19.73■□□□□ 0.75
CTNNB1P35222 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.73■□□□□ 0.75
CTNNB1P35222 KRT89P-201ENST00000620027 1478 ntBASIC19.73■□□□□ 0.75
CTNNB1P35222 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTNNB1P35222 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNB1P35222 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTNNB1P35222 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNB1P35222 AC096582.2-201ENST00000510860 516 ntBASIC19.73■□□□□ 0.75
CTNNB1P35222 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNNB1P35222 KRT18P58-201ENST00000527480 1120 ntBASIC19.73■□□□□ 0.75
CTNNB1P35222 AC092865.5-201ENST00000545435 363 ntBASIC19.73■□□□□ 0.75
CTNNB1P35222 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.73■□□□□ 0.75
CTNNB1P35222 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.73■□□□□ 0.75
CTNNB1P35222 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNNB1P35222 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.73■□□□□ 0.75
CTNNB1P35222 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.73■□□□□ 0.75
CTNNB1P35222 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNB1P35222 LINC01006-201ENST00000333319 2292 ntBASIC19.73■□□□□ 0.75
CTNNB1P35222 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CTNNB1P35222 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNNB1P35222 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNNB1P35222 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTNNB1P35222 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CTNNB1P35222 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNNB1P35222 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNNB1P35222 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTNNB1P35222 AC093909.1-201ENST00000504731 1122 ntBASIC19.72■□□□□ 0.75
CTNNB1P35222 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.72■□□□□ 0.75
CTNNB1P35222 BNIP3P18-201ENST00000593976 575 ntBASIC19.72■□□□□ 0.75
CTNNB1P35222 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNNB1P35222 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNNB1P35222 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNNB1P35222 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNNB1P35222 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNB1P35222 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CTNNB1P35222 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNB1P35222 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNB1P35222 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNNB1P35222 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNNB1P35222 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.71■□□□□ 0.75
CTNNB1P35222 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNNB1P35222 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNNB1P35222 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNNB1P35222 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.71■□□□□ 0.75
CTNNB1P35222 AC148477.8-201ENST00000624298 468 ntBASIC19.71■□□□□ 0.75
CTNNB1P35222 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 IRX1P1-201ENST00000438849 1838 ntBASIC19.71■□□□□ 0.75
CTNNB1P35222 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.71■□□□□ 0.75
CTNNB1P35222 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNNB1P35222 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CTNNB1P35222 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNB1P35222 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTNNB1P35222 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CTNNB1P35222 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms