Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSP1P33241 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LSP1P33241 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSP1P33241 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSP1P33241 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.73■□□□□ 0.59
LSP1P33241 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSP1P33241 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.73■□□□□ 0.59
LSP1P33241 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSP1P33241 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSP1P33241 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.72■□□□□ 0.59
LSP1P33241 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 AC010536.3-201ENST00000620306 533 ntBASIC18.72■□□□□ 0.59
LSP1P33241 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 MTMR9LP-203ENST00000426597 1545 ntBASIC18.72■□□□□ 0.59
LSP1P33241 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSP1P33241 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.72■□□□□ 0.59
LSP1P33241 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSP1P33241 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LSP1P33241 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.72■□□□□ 0.59
LSP1P33241 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.71■□□□□ 0.59
LSP1P33241 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
LSP1P33241 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.71■□□□□ 0.59
LSP1P33241 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 AC007322.4-201ENST00000509611 723 ntBASIC18.71■□□□□ 0.59
LSP1P33241 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LSP1P33241 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.71■□□□□ 0.59
LSP1P33241 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
LSP1P33241 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.71■□□□□ 0.59
LSP1P33241 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.71■□□□□ 0.59
LSP1P33241 AC011270.2-201ENST00000624293 2550 ntBASIC18.71■□□□□ 0.59
LSP1P33241 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LSP1P33241 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSP1P33241 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.7■□□□□ 0.58
LSP1P33241 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.7■□□□□ 0.58
LSP1P33241 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
LSP1P33241 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LSP1P33241 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LSP1P33241 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.7■□□□□ 0.58
LSP1P33241 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.7■□□□□ 0.58
LSP1P33241 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.7■□□□□ 0.58
LSP1P33241 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.7■□□□□ 0.58
LSP1P33241 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 CYP2T3P-201ENST00000601990 817 ntBASIC18.7■□□□□ 0.58
LSP1P33241 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LSP1P33241 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LSP1P33241 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 AL023806.1-201ENST00000603994 1649 ntBASIC18.7■□□□□ 0.58
LSP1P33241 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.7■□□□□ 0.58
LSP1P33241 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSP1P33241 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LSP1P33241 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms