Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC6A4P31645 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A4P31645 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.14■□□□□ 0.65
SLC6A4P31645 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
SLC6A4P31645 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC6A4P31645 AL121956.5-201ENST00000625261 221 ntBASIC19.14■□□□□ 0.65
SLC6A4P31645 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SLC6A4P31645 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 KRT8P50-201ENST00000562022 1438 ntBASIC19.14■□□□□ 0.65
SLC6A4P31645 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC6A4P31645 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC6A4P31645 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SLC6A4P31645 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC6A4P31645 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SLC6A4P31645 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A4P31645 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A4P31645 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
SLC6A4P31645 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC6A4P31645 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 ZNF444P1-201ENST00000559497 298 ntBASIC19.13■□□□□ 0.65
SLC6A4P31645 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC6A4P31645 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SLC6A4P31645 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC6A4P31645 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLC6A4P31645 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC6A4P31645 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC6A4P31645 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC6A4P31645 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC6A4P31645 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC6A4P31645 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC6A4P31645 AL499627.1-201ENST00000569373 2188 ntBASIC19.12■□□□□ 0.65
SLC6A4P31645 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC6A4P31645 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SLC6A4P31645 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A4P31645 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A4P31645 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A4P31645 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC6A4P31645 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.12■□□□□ 0.65
SLC6A4P31645 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC6A4P31645 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC6A4P31645 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SLC6A4P31645 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A4P31645 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC6A4P31645 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A4P31645 AC005332.1-201ENST00000577698 1310 ntBASIC19.11■□□□□ 0.65
SLC6A4P31645 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A4P31645 KRT18P41-201ENST00000518924 1277 ntBASIC19.11■□□□□ 0.65
SLC6A4P31645 VENTXP5-201ENST00000523979 775 ntBASIC19.11■□□□□ 0.65
SLC6A4P31645 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC6A4P31645 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
SLC6A4P31645 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC6A4P31645 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC6A4P31645 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC6A4P31645 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC6A4P31645 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 PCED1CP-201ENST00000419887 785 ntBASIC19.1■□□□□ 0.65
SLC6A4P31645 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC6A4P31645 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SLC6A4P31645 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms