Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GAP43P17677 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.54■□□□□ 0.88
GAP43P17677 AC126763.1-201ENST00000552015 2118 ntBASIC20.54■□□□□ 0.88
GAP43P17677 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.54■□□□□ 0.88
GAP43P17677 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAP43P17677 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.54■□□□□ 0.88
GAP43P17677 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAP43P17677 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.54■□□□□ 0.88
GAP43P17677 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAP43P17677 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAP43P17677 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
GAP43P17677 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 ECEL1P3-201ENST00000427961 737 ntBASIC20.53■□□□□ 0.88
GAP43P17677 AC009947.2-201ENST00000444014 672 ntBASIC20.53■□□□□ 0.88
GAP43P17677 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.53■□□□□ 0.88
GAP43P17677 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.53■□□□□ 0.88
GAP43P17677 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.53■□□□□ 0.88
GAP43P17677 AC112497.1-201ENST00000624824 639 ntBASIC20.53■□□□□ 0.88
GAP43P17677 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.53■□□□□ 0.88
GAP43P17677 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GAP43P17677 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
GAP43P17677 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.53■□□□□ 0.88
GAP43P17677 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GAP43P17677 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.53■□□□□ 0.88
GAP43P17677 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAP43P17677 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 AC005082.1-201ENST00000413042 2259 ntBASIC20.52■□□□□ 0.88
GAP43P17677 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.52■□□□□ 0.88
GAP43P17677 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.52■□□□□ 0.88
GAP43P17677 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.52■□□□□ 0.88
GAP43P17677 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
GAP43P17677 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.52■□□□□ 0.88
GAP43P17677 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.52■□□□□ 0.88
GAP43P17677 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.52■□□□□ 0.88
GAP43P17677 NEK4P2-201ENST00000580004 1012 ntBASIC20.52■□□□□ 0.88
GAP43P17677 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.52■□□□□ 0.88
GAP43P17677 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GAP43P17677 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.52■□□□□ 0.87
GAP43P17677 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
GAP43P17677 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
GAP43P17677 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.52■□□□□ 0.87
GAP43P17677 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 AC090164.3-201ENST00000610780 2143 ntBASIC20.51■□□□□ 0.87
GAP43P17677 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GAP43P17677 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms